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B.C. lab cracks suspected SARS code
CBC News ^ | Apr 12, 2003

Posted on 04/13/2003 4:04:24 AM PDT by Black Powder

VANCOUVER - Scientists at a Canadian research centre say they've mapped the genomic sequence of the virus believed to cause SARS, a move that could take the world a step closer to a reliable test for the illness.

Researchers in B.C. abandoned their usual work on cancer to focus on a sample of a coronavirus from a patient with severe acute respiratory syndrome.

Early Saturday morning, they finished work on the project at Michael Smith Genome Sciences Centre in British Columbia. The team was helped by the B.C. Centre for Disease Control and Winnipeg's National Microbiology Laboratory.

"This is a huge step forward in the fight to control the spread of SARS," said Dr. Caroline Astell, projects leader at the genome centre.

The facility's director, Dr. Marco Marra, hopes that the genetic blueprint will eventually lead to "a reliable and robust diagnostic test" for the illness.

"It seemed to us that it would be important for us to bend our talents towards an identification of the agent responsible for SARS," Marra told CBC News Saturday. The complete sequence will be posted on the centre's Web site to help SARS researchers around the world, he said.

Since the global outbreak of SARS last month, doctors have focused on the coronavirus as a likely suspect. Many top researchers think the virus, which normally causes a cold, may have mutated – perhaps as it moved from animals to people.

Word of the genomic sequence was hailed by the World Health Organization on the weekend. It was also welcomed by researchers in Toronto, the city hit hardest by SARS in Canada.

Dr. Donald Low, director of microbiology at Mount Sinai Hospital, said the code was mapped with "unprecedented" speed, far more quickly than many people expected.

"It's positive in the sense that it really gives us something to help understand exactly where this thing comes from," Low said in an interview with CBC News Saturday.

"More importantly, (it may reveal) why it's been able to do what it's been able to do – causing disease with such a high mortality rate, and causing such severe disease in those patients who've come down with it."

As of Saturday, 13 people had died of SARS in Canada – all of them around Toronto. There were a total of 223 probable or suspected cases in Ontario, and roughly 275 across the country. Globally, about 2,950 people in 19 countries are believed to have contracted SARS, according to the World Health Organization. At least 119 have died.


TOPICS: Canada; Culture/Society; Foreign Affairs; Miscellaneous; News/Current Events
KEYWORDS: bc; canada; genome; sars

1 posted on 04/13/2003 4:04:25 AM PDT by Black Powder
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To: Black Powder; aristeides
This is a good testimonial to the rapid ability of genomics to detail the SARS coronavirus in a few days, but consider also what this means to bioweapons designers to have this information floating around the internet.

???

2 posted on 04/13/2003 6:19:24 AM PDT by flamefront (Take the oil money from the islamofascists! And don't give it to the UN. To the victors ...)
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3 posted on 04/13/2003 6:19:52 AM PDT by Support Free Republic (Your support keeps Free Republic going strong!)
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To: Black Powder; CathyRyan; Mother Abigail; Dog Gone; Petronski; per loin; flutters; InShanghai; ...
How much will this advance the development of a test?
4 posted on 04/13/2003 6:44:27 AM PDT by aristeides
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To: aristeides
Good question. I wonder if we have a molecular biologist in the house.
5 posted on 04/13/2003 9:30:52 AM PDT by Dog Gone
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To: Black Powder; the_doc; Calpernia
FYI.
6 posted on 04/13/2003 11:43:05 AM PDT by Dr. Eckleburg (There are very few shades of gray.)
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To: Black Powder
So, they've mapped it but they failed to explain where it originated.
7 posted on 04/13/2003 11:49:04 AM PDT by mtbopfuyn
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To: Dr. Eckleburg

Malaysia continued to block entry of visitors from China and Hong Kong, despite protests from tour operators who feared it would batter the tourism industry.

Philippines President Gloria Arroyo asked overseas compatriots who suspect they may have been infected with Sars to stay away, ahead of the Easter holidays. The Philippines reported its first "probable" case of the virus on Friday. However, officials said the 64-year-old male foreigner has since been cured.

Two crew members of a luxury cruise ship, with more than 800 passengers on board, have been confined at a Singapore hospital, with suspected Sars.

An unidentified British man is being treated in hospital in Jakarta, as Indonesia's first probable case of Sars.

8 posted on 04/13/2003 1:51:21 PM PDT by Calpernia (Nancy = Bipolar - "This has been a public service announcement")
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To: Dr. Eckleburg; the_doc
This is what is posted for the gene sequence: http://mkweb.bcgsc.ca/sars/TOR2_genome_shotgun_120403.fasta.gz

Oddly enough, the WHO website isn't up to date with this yet. You would think there would be an immediate response for this information.
9 posted on 04/13/2003 1:59:04 PM PDT by Calpernia (Nancy = Bipolar - "This has been a public service announcement")
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To: Calpernia
Cruise ship. Yikes.

Thanks for the map.

Easter vacation looks just fine from my backyard.

Have you ever read a list of names of those infected?

10 posted on 04/13/2003 2:20:32 PM PDT by Dr. Eckleburg (There are very few shades of gray.)
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To: Dr. Eckleburg
No names, no general case histories, no commonalities, nothing.

If it wasn't for the news, you would never know it existed.

Even yesterday, a person was diagnosed here (meaning USA) with measles. You heard some of the persons background. SARs seems to be very secretive.
11 posted on 04/13/2003 6:53:18 PM PDT by Calpernia (Nancy = Bipolar - "This has been a public service announcement")
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To: Dr. Eckleburg
I'm reading this thread: http://www.freerepublic.com/focus/f-news/892556/posts

Again, it is suspect of coming from animals. have you noticed any info or reports about animals coming down with this? Are they just carriers? Does anyone have any suspected infectious animals or carriers isolated?

12 posted on 04/13/2003 7:01:32 PM PDT by Calpernia (Nancy = Bipolar - "This has been a public service announcement")
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